/* * kmolcalc.cpp * * Copyright (C) 2000,2001 Tomislav Gountchev * Copyright (C) 2002 Carsten Niehaus */ /** * KMOLCALC is the calculation engine. It knows about a hashtable of user defined atomic * weights and group definitions ELSTABLE, and the currently processed formula, stored * as a list of elements and their coefficients, ELEMENTS. */ #include "kmolcalc.h" #include /** * Construct a new calculator object. */ KMolCalc::KMolCalc() { elements = new ElementList; elstable = NULL; readElstable(); } KMolCalc::~KMolCalc() { delete elements; } void KMolCalc::readElstable() { weight = -1; // not calculated yet if (elstable) delete elstable; elstable = new QDict (197, TRUE); elstable->setAutoDelete(TRUE); mwfile = QPEApplication::qpeDir() +"share/oxygen/kmolweights"; QFile f(mwfile); if (f.exists()) readMwfile(f); } /** * Parse a string S and construct the ElementList this->ELEMENTS, representing the * composition of S. Returns 0 if successful, or an error code (currently -1) if * parsing failed. * The elements is S must be valid element or group symbols, as stored in this->ELSTABLE. * See help files for correct formula syntax. */ QString KMolCalc::readFormula(const QString& s) { weight = -1; if (elements) delete elements; elements = new ElementList; return KMolCalc::readGroup(s, elements); } // read a formula group recursively. Called by readFormula. QString KMolCalc::readGroup(const QString& s, ElementList* els) { if (s.isEmpty()) return QString ("Enter a formula."); //ERROR int sl = s.length(); int i = 0; QString errors ("OK"); bool ok = TRUE; while (i < sl && ((s[i] <= '9' && s[i] >= '0') || s[i] == '.')) i++; double prefix = (i == 0 ? 1 : s.left(i).toDouble(&ok)); if (! ok || i == sl || prefix == 0) return QString ("Bad formula."); // ERROR ElementList* elstemp = new ElementList; while (i < sl) { int j = i; if (s[i] == '(') { ElementList* inner = new ElementList; int level = 1; // count levels of nested ( ). while (1) { if (i++ == sl) { delete inner; delete elstemp; return QString ("Bad formula."); //ERROR } if (s[i] == '(') level++; if (s[i] == ')') level--; if (level == 0) break; } errors = KMolCalc::readGroup(s.mid(j+1, i-j-1), inner); j = ++i; while (i < sl && ((s[i] <= '9' && s[i] >= '0') || s[i] == '.')) i++; double suffix = (i == j ? 1 : s.mid(j, i-j).toDouble(&ok)); if (! ok || suffix == 0) { delete inner; delete elstemp; return QString ("Bad formula."); // ERROR } inner->addTo(*elstemp, suffix); delete inner; inner = NULL; } else if ((s[i] >= 'A' && s[i] <= 'Z') || (s[i] >= 'a' && s[i] <= 'z')) { while (++i < sl && ((s[i] >= 'a' && s[i] <= 'z') || s[i] == '*' || s[i] == '\'')); QString elname = s.mid(j, i-j); j = i; while (i < sl && ((s[i] <= '9' && s[i] >= '0') || s[i] == '.')) i++; double suffix = (i == j ? 1 : s.mid(j, i-j).toDouble(&ok)); if (! ok || suffix == 0) { delete elstemp; return QString ("Bad formula."); // ERROR } SubUnit* group = elstable->find(elname); if (group == 0) { delete elstemp; return QString ("Undefined symbol: ") + elname; //ERROR } group->addTo(*elstemp, suffix); } else if (s[i] == '+') { if (elstemp->isEmpty()) { delete elstemp; return QString ("Bad formula."); //ERROR } elstemp->addTo(*els, prefix); delete elstemp; errors = KMolCalc::readGroup(s.mid(i+1, sl-i-1), els); return errors; } else { delete elstemp; return QString ("Bad formula."); //ERROR } } elstemp->addTo(*els, prefix); delete elstemp; return errors; } /** * Calculate and return the molecular weight of the current chemical formula. */ double KMolCalc::getWeight() { if (weight == -1) weight = elements->getWeight(elstable); return weight; } /** * Return the elemental composition of the current formula, as a string of tab-separated * element - percentage pairs, separated by newlines. */ QString KMolCalc::getEA() { if (weight == -1) weight = elements->getWeight(elstable); if (weight == -1) return QString("ERROR: Couldn't get Mw..."); // ERROR return elements->getEA(elstable, weight); } /** * Return the empirical formula of the current compound as a QString. */ QString KMolCalc::getEmpFormula() { return elements->getEmpFormula(); } // Read the element definition file. void KMolCalc::readMwfile(QFile& f) { if (! f.open(IO_ReadOnly)) return; //ERROR QTextStream fs (&f); QString line; while (! fs.eof()) { line = fs.readLine(); SubUnit* s = SubUnit::makeSubUnit(line); elstable->replace(s->getName(), s); } f.close(); } /** * Remove a group or element definition from ELSTABLE. */ void KMolCalc::undefineGroup (const QString& name) { elstable->remove (name); } /** * Add a new element name - atomic weight record to the ELSTABLE hashtable. Assumes * NAME has valid syntax. */ void KMolCalc::defineElement (const QString& name, double weight) { Element* el = new Element(name, weight); elstable->replace(name, el); } /** * Add a new group definition to the ELSTABLE. Returns 0 if OK, -1 if parsing FORMULA * fails. Assumes the syntax of grpname is correct. */ QString KMolCalc::defineGroup (const QString& grpname, const QString& formula) { ElementList* els = new ElementList(grpname); QString error = readGroup(formula, els); if (error != "OK") return error; if (els->contains(grpname)) return QString("Can't define a group recursively!\n"); elstable->replace(grpname, els); return QString("OK"); }